Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence------------MKKAFILSAAAAVGLFTFGGVQQASAKELSCQPVVTVKTGNTVQNM------SLNDAVKKLHINTNIKTL--NAANEKEMKQLLQKHAKQSNVKVQDVQKTETAKPAQKTTEKAAA----DQNTASKAPATAEKTNTTTSAPSSVSA-YEKKVVELTNAE----RQKQGLKPLQIDETLSKSARAKSQDMK--DKNYFDHQSPTYGSP----FDMMKSFGISYKTAG----ENIAKGQKTPEEVVKAWMNSEGHRKNILNP---NFTHIGVGYVESGSIWTQQFIGK--
4WBX Chain:C ((4-382))RFPFPVGEPDFIQGDEAIARAAILAGCRFYAGYPITPASEIFEAMALYMPLVDGVVIQMEDEIASIAAAIGASWAGAKAMTATSGPGFSLMQENIGYAVMTETPVVIVDVQRSGL--PAQGDIMQAIWGTHGDHSLIVLSPSTVQEAFDFTIRAFNLSEKYRTPVILLTDAEVGHMRERVYIPNPDEIEIINRLIKRIVEKIEKNKKDIFTYETYELEDAVATGIVARSALLLKIETIWPFDFELIERIAERVDKLYVPEMNL-GQLYHLIKEGANGKAEVKLISKIGGEVHTPMEIFEFI


General information:
TITO was launched using:
RESULT:

Template: 4WBX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 1343 -44501 -33.14 -175.20
target 2D structure prediction score : 0.43
Monomeric hydrophicity matching model chain C : 0.64

3D Compatibility (PKB) : -33.14
2D Compatibility (Sec. Struct. Predict.) : 0.43
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.154

(partial model without unconserved sides chains):
PDB file : Tito_4WBX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4WBX-query.scw
PDB file : Tito_Scwrl_4WBX.pdb: