Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNIQDMILTLQKHWSSQGCVLMQAYDVEKGAGTMSPYTFLRSIGPEPWKVAYVEPSRRPADGRYGENPNRLYQHHQFQVIIKPSPDNIQELYLDSLRALGIDPLEHD-----------------IRFVEDNWENPSLGCAGLGWE---------VWLDGMEITQFTYFQQVGGLECKPVSVEITYGI-----ERLASYIQDKEN----------VFDLEWTSGFTVKDLF----MMAEYE----------HSVYTFETSDVDMLFQLFSTYEKEAIKQMDNGLVHPAYDYVLKCS----HTFNLLDAKGAISVT------ERTGYIARVRNL--ARKVAKTYYEEREKLGFPMLKGEGSSHE----
4B3X Chain:A ((1-363))MA-KVRIYQLAKELGMETQELLELLD-QMGVAYKSHASTLEEKDAEAVR-ELVKEQRGLQEKLAEEERRKSLPRRPPVVVIMGHVDHGKTTLLDYLRKSRIAEKEGGGITQHVGAFEVKTPQGTVVFIDTPGHEAFTTIRQRGAKVADIAVIVIAADDGIMPQTEEAIAHAKAAGAKLIFAINKIDLPQADPEKVKRQLMERGFVPEEYGGDAIVIPISAKTGQGVQDLLEMILLLAELEDYRADPNAEPRGVILESKLDKQAGIIANMLVQEGTFRVGDYVVAGEAYGRIRAMMDADGNQRKEAGPGSAVQVLGFQELPHAGDVVEWVPDLEAAKEIAEERKEERKAREEEEKARRPRTMAELLR


General information:
TITO was launched using:
RESULT:

Template: 4B3X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1243 -1763 -1.42 -6.04
target 2D structure prediction score : 0.47
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -1.42
2D Compatibility (Sec. Struct. Predict.) : 0.47
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.170

(partial model without unconserved sides chains):
PDB file : Tito_4B3X.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4B3X-query.scw
PDB file : Tito_Scwrl_4B3X.pdb: