Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMERISWNQYFMAQSHLLALRSTCPRLSVGATIVRDKRMIAGGYNGSIAGGVHCADEGCLMIDDHCAR--TIHAEMNAILQCSKFGVPTDGAEIYVTHYPCIQCCKSIIQAGIKTVYYAEDYKTHPYAQELFEQAGVTVEQVELDEMIVDLKNREKLSFVAGLIGKLADAGLAEEELKKIHEQANTLFTSYV
4P9C Chain:C ((12-138))---------YMKTAELFSQVSNCKRMKVGAIVVKNGSILAHGWNGTPSG----FHTNCCELEDGSTNPFVLHAEQNALVKMAKSSESIDGSELFCTHSPCPDCSKMIAQAGVKKVYYRNEYRITD-GIDVLQQLGVEVEKM--------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4P9C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 648 -19758 -30.49 -158.06
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain C : 0.71

3D Compatibility (PKB) : -30.49
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.587

(partial model without unconserved sides chains):
PDB file : Tito_4P9C.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4P9C-query.scw
PDB file : Tito_Scwrl_4P9C.pdb: