Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKTVKVNIVTPDGPVYDADIEMVSVRAESGDLGILPGHIPTVAPLKIGAVRLKKD-GQTEMVAVSGGFVEVRPDHVTILAQAAETAEGIDKERAEAARQRAQERLNSQSDDTDIRRAELALQRALNRLDVAGK
1AQT Chain:A ((2-132))-STYHLDVVSAEQQMFSGLVEKIQVTGSEGELGIYPGHAPLLTAIKPGMIRIVKQHGHEEFIYLSGGILEVQPGNVTVLADTAIRGQDLDEARAMEAKRKAEEHISSSHGDVDYAQASAELAKAIAQLRVIE-


General information:
TITO was launched using:
RESULT:

Template: 1AQT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 556 -35240 -63.38 -271.07
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain A : 0.83

3D Compatibility (PKB) : -63.38
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.83
QMean score : 0.623

(partial model without unconserved sides chains):
PDB file : Tito_1AQT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1AQT-query.scw
PDB file : Tito_Scwrl_1AQT.pdb: