Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTHGMVLGKFMPPHAGHVYLCEFARRWV--DELTIVVGSTAAE--PIPGAQRVAWMRELFPFDRVVHLANENPQ--RPWEHPDFWDIWKASLQGVLATRPD-FVFGAEPYNADFAQVLG-------ARFVAVDH--------GRTVVPVTATDIRADPL--GHWQHIPRCVRPAFVKRVSIIGPESTGKTTLAQAVAEKLRTKWVPERAKMLRELNGGSLIGLEWAEIVRGQIASEEALARDADRVLICDTDPLATTVWAEFLAGGCPQELRDLARRPYDLTLLTTPDVPWDADDGRCVPGARGTFFARCEQALRAAGRSFVVITGGWEERLSVSLRAVEELVRARR |
| 4YMI Chain:A ((28-224)) | RRLGVMGGTFDPIHNGHLVAASEVADRFALDEVIFVPTGQP--RKVSPAEHRYLMTVIATASNPRFTVSRADIDRGGATYT----VDTLTDLRTAHP-DADLYFITGADALASILSWENWEQLFTLAKFIGVSRPGYGLSLVEVPALAISSTDCRIRAGQARPIWYLVPDGVVQYVAKHRLYSG------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4YMI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -97107 for 1190 contacts (-81.6/contact) +
2D Compatibility (PS) -16266 + (NN) -6967 + (LL) 12492
1D Compatibility (HY) -2000 + (ID) 1100
Total energy: -110948.0 ( -93.23 by residue)
QMean score : 0.358
|
|
|