Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MASTLTTGLPPGP-RLPRYLQSVLYLRFREWFLPAMHRKYGDVFSLRVPPYADNLVVYTRPEHIKEIFAADPRSLHAGEGN-HILGFVMGEHSVLMTDEAEHARMRSLLMPAFTRAALRGYRDMIASVAREHITRWRP-------HATINSLDHMNALTLDIILRVVFGVTDPKVK-AELTSRLQQIINIHPAILAGVPYPSLKRMNPWKRFFHNQTKIDEILYREIASRRIDSDLTARTDVLSRLLQTKDT-PTKPLTDAELRDQLITLLLAGHETTAAALSWTLWELAHAPEIQSQVVWAAVG--G-----------DD-GFLEAVLKEGMRRHTVIASTARKVTAPAEI--GGWRLPAGTVVNTSILLAHASEVSHPKPTEFRPSRFLDGSV-------------------APNTWLPFGGGVRRCLGFGFALTEGAVILQEIFRRFTITAAGPSKGET-PLVRNITTVPKHGAHLRLIPQRRLGGLGDSDPP |
4LXJ Chain:A ((57-532)) | ---------PLVFYWIPWVGSAVVYGMKPYEFFEECQKKYGDIFSFVLLG--RVMTVYLGPKGHEFVFNAKLADVSAEAAYAHLTTPVFGKGVIYDCPNSRLMEQKKFVKGALTKEAFKSYVPLIAEEVYKYFRDSKNFRLNERTTGTIDVMVTQPEMTIFTASRSLLGKEMRAKLDTDFAYLYSDLDKGFTPI--NFVFPNL-PLEHYRKRDHAQKAISGTYMSLIKERRKNND-IQDRDLIDSLMKNSTYKDGVKMTDQEIANLLIGVLMGGQHTSAATSAWILLHLAERPDVQQELYEEQMRVLDGGKKELTYDLLQEMPLLNQTIKETLRMHHPLHSLFRKVMKDMHVPNTSYVIPAGYHVLVSPGYTHLRDEYFPNAHQFNIHRWNNDSASSYSVGEEVDYGFGAISKGVSSPYLPFGGGRHRCIGEHFAYCQLGVLMSIFIRTLKWHYPE-GKTVPPPDFTSMVTLPTGPAKIIWEKRNPEQKIGG---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LXJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -210405 for 3542 contacts (-59.4/contact) +
2D Compatibility (PS) -46906 + (NN) -28748 + (LL) 932
1D Compatibility (HY) -24800 + (ID) 4850
Total energy: -314777.0 ( -88.87 by residue)
QMean score : 0.462
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