Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------MTMNGQPAELHRPIPTLARLPRPVYARAESLRAGSWTSRHRHAWVQLSYAISGVLGVHTAEGSFFAPPQRAIWIPAQLEHEVVTSTRAEMRSLYIRGDACAWAPTRCRVLEVTPLARELIKSFCELPVDYPEGDSAESRLVQVLLDQLRLLPEVAFSLPMPREPRLLRLCQALIDEP-TQSLTMGDWAQRLGTSEKTLSRLFQRETGMNYRLWRQRQRLLASLNALEAGD-SVTGAALDSGYDSTSAYIAAFKGLFGFTPGELFRQR--- |
| 3GBG Chain:A ((4-273)) | KKSFQTNVYRMSKFDTYIFNNLYINDYKMFWIDSGIAKLIDKNCLVSYEINSSSIILLKKNSIQRFSLTSLSDEN----INVSV-ITISDSFIRSLKSYILGNKD----------LLLWNCEHNDIAVLSEVVNGFREINYSDEFLKVFFSGFFSKVEKKYNSIFITDDLDAMEKISCLVKSDITRNWRWADICGELRTNRMILKKELE-SRGVKFRELINSIRISYSISLMKTGEFKIKQIAYQSGFASVSYFSTVFKSTMNVAPSEYLFMLTGV |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GBG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -91018 for 1872 contacts (-48.6/contact) +
2D Compatibility (PS) -26561 + (NN) -7436 + (LL) 1668
1D Compatibility (HY) -11200 + (ID) 1500
Total energy: -136047.0 ( -72.67 by residue)
QMean score : 0.380
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