Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDLRQLRYFIALAEHRSFVRAADAMGITQPAFSRSIQGLEQELGCQLVDRGSKDLRPTPEGQVVLQHALSLVQGSANLIHEIAQLNKLDAGELRFGSGPAPAQQLVPDAVADFINRHPRVQISLDVDNWEKLSRALLREEIEFFVADIRDFEADPNFQTRPLTPRRGQFFCRPQHPLLGKDSLSTNDLFNYPLASTLIPPGIRK-L-LANLSGK-IDFAANIRCENMHALIRIVRQTDAIGIASDETLRPYLQRGELQPLQWRN-LPQNLDSLSARCGIISRSGYRLSAAAKAMIETLVELDQAQHAAA |
3HHG Chain:A ((3-294)) | TNSEELTVFVQVVESGSFSRAAEQLAMANSAVSRIVKRLEEKLGVNLLNRTTRQLSLTEEGAQYFRRAQRILQEMAAAETEMLAVHEIPQGVLSVDSAMPMVLHLLAPLAAKFNERYPHIRLSLVSSE---GYINLIERKVDIALRAGELD--DSGLRARHLFDSRFRVIASPEYLAKHGTPQSTEELAGHQCLGFTEPGSLNTWAVLDAQGNPYKISPH-FTASSGEILRSLCLSGCGIVCLSDFLVDNDIAEGKLIPLLAEQTSD-----KTHPFNAVYYSDKAVNLRLRVFLDFLVEELG------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HHG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -112187 for 2116 contacts (-53.0/contact) +
2D Compatibility (PS) -30129 + (NN) -6524 + (LL) 1344
1D Compatibility (HY) -10000 + (ID) 2900
Total energy: -160396.0 ( -75.80 by residue)
QMean score : 0.425
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