Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTDVARLLALRSFTELGARQRARALLDAGSFRELLDPFAGVQSPWLERQGIVPQADDGVVVARGLLDGQPAVLAAIEGAFQGGSLGEVSGAKIAGALELAAEDNRNGVPTRALLLLETGGVRLQEANLGLAAIAEIQAAIVDLQRYQPVVAVIAGPVGCFGGMSIAAGLCSYVLVTRE-ARLGLNGPQVIEQEAGIAEYDSRDRPFIWSLTGGE-QRFASGLADAYLADDLDEVRTSVLAYFAKGLP----------------ARPRCRRAEDYLRRLGDLDTAEQPDAAGVRRLYQGLGQGDAT |
| 3N6R Chain:B ((45-305)) | ------IDAQHGRGKLTARERVDLLLDEGSFEEFD-MFVTHRCTDFN-MQDQKPAGDGVVTGWGTINGRVVYVFSQDFTVLGGSVSETHSKKICKIMDMAMQ-----NGAPVIGINDSGGARIQEGVDSLAGYGEVFQRNIMASGVVPQISMIMGP--CAGGAVYSPAMTDFIFMVKDSSYMFVTGPDVVKTVTNEQ-VSAEE------LGGATTHTRKSSVADAAFENDVEALAE-VRRLVDFLPLNNREKPPVRPFFDDPDRIEPSLDTLVPDNPNTPYDMKELIHKLADEGDFYEIQEEFAK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3N6R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -99830 for 1971 contacts (-50.6/contact) +
2D Compatibility (PS) -26840 + (NN) -14509 + (LL) 856
1D Compatibility (HY) -7200 + (ID) 2700
Total energy: -150223.0 ( -76.22 by residue)
QMean score : 0.332
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