Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSMRLKLLRKKLGVTLETLAEKTGLTKSYLSKVERGLNTPSIAAALKLAKALNVQVEELFSEESDGVDGYSIVRRDQRKSLSSGDDGPAYASLAQQIGARALLPFIVHPPRDFSHSTFKEHLGEEFIFVHEGQVEVDFMNQRIILERGDALHFNAQKPHRIRSLGETQAELLVVIHSDE
3F52 Chain:A ((33-90))
----LRSFRADKGVTLRELAEASRVSPGYLSELERGRKEVSSELLASVCHALGASVADVLIEAAGSMALQ-------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3F52.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23961 for 377 contacts (-63.6/contact) +
2D Compatibility (PS) -6471 + (NN) -4724 + (LL) 7088
1D Compatibility (HY) -3200 + (ID) 1000
Total energy: -32268.0 ( -85.59 by residue)
QMean score : 0.800
(partial model without unconserved sides chains):
PDB file :
Tito_3F52.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3F52-query.scw
PDB file :
Tito_Scwrl_3F52.pdb
: