Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATVQQLEGRWRLVDSKGFDEYMKELGVGIALRKMGAMAKPDCIITCDGKNLTIKTESTLKTTQFSCTLGEKFEETTADGRKTQTVCNFTDGALVQHQEWDGKESTITRKLKDGKLVVECVMNNVTCTRIYEKVE
4A60 Chain:A ((21-153))
QSMVEPFLGTWKLVSSENFEDYMKELGVNFAARNMAGLVKPTVTISVDGKMMTIRTESSFQDTKISFKLGEEFDETTADNRKVKSTITLENGSMIHVQKWLGKETTIKRKIVDEKMVVECKMNNIVSTRIYEK--
General information:
TITO was launched using:
RESULT:
Template:
4A60.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37747 for 948 contacts (-39.8/contact) +
2D Compatibility (PS) -14920 + (NN) -2738 + (LL) 296
1D Compatibility (HY) -12800 + (ID) 3300
Total energy: -71209.0 ( -75.11 by residue)
QMean score : 0.546
(partial model without unconserved sides chains):
PDB file :
Tito_4A60.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4A60-query.scw
PDB file :
Tito_Scwrl_4A60.pdb
: