Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHHYREQIKRVKDSEDVPMVLVGNKCDLPSRTVDTKQAQDLARSYGIPFIETSAKTRQRVEDAFYTLVREIRQYRLKKISKEEKTPGCVKIKKCIIM
3GFT Chain:E ((19-185))
MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAG-------RDQYMRTGEGFLCVFAINNTKSFEDIHHYREQIKRVKDSEDVPMVLVGNKCDLPSRTVDTKQAQDLARSYGIPFIETSAKTRQGVDDAFYTLVREIRKHK----------------------
General information:
TITO was launched using:
RESULT:
Template:
3GFT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -98215 for 1299 contacts (-75.6/contact) +
2D Compatibility (PS) -17866 + (NN) -7189 + (LL) 2616
1D Compatibility (HY) -22000 + (ID) 7750
Total energy: -150404.0 ( -115.78 by residue)
QMean score : 0.514
(partial model without unconserved sides chains):
PDB file :
Tito_3GFT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3GFT-query.scw
PDB file :
Tito_Scwrl_3GFT.pdb
: