Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATRSPGVVISDDEPGYDLDLFCIPNHYAEDLERVFIPHGLIMDRTERLARDVMKEMGGHHIVALCVLKGGYKFFADLLDYIKALNRNSDRSIPMTVDFIRLKSYCNDQSTGDIKVIGGDDLSTLTGKNVLIVEDIIDTGKTMQTLLSLVRQYNPKMVKVASLLVKRTPRSVGYKPDFVGFEIPDKFVVGYALDYNEYFRDLNHVCVI-SETGKAKYKA
3O7M Chain:A ((5-177))
----------------------------NIEIKDTLISEEQLQEKVKELALQIERDFEGEEIVVIAVLKGSFVFAADLIRHI---------KNDVTIDFISASSYG------KVKLLKDI-DVNITGKNVIVVEDIIDSGLTLHFLKDHFFMHKPKALKFCTLLDKPERRKVDLTAEYVGFQIPDEFIVGYGIDCAEKYRNLPFIASVVT---------
General information:
TITO was launched using:
RESULT:
Template:
3O7M.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -166973 for 1279 contacts (-130.5/contact) +
2D Compatibility (PS) -18277 + (NN) -6059 + (LL) 1580
1D Compatibility (HY) -14400 + (ID) 2900
Total energy: -207029.0 ( -161.87 by residue)
QMean score : 0.369
(partial model without unconserved sides chains):
PDB file :
Tito_3O7M.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3O7M-query.scw
PDB file :
Tito_Scwrl_3O7M.pdb
: