Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVRPLNCIVAVSQNMGIGKNGDLPWPPLRNEFQYFQRMTTVSSVEGKQNLVIMGRKTWFSIPEKNRPLKDRINIVLSRELKEPPKGAHFLAKSLDDALELIEDPELTNKVDVVWIVGGSSVYKEAMNKPGHVRLFVTRIMQEFESDAFFPEIDFEKYKLLPEYPGVPLDVQEEKGIKYKFEVYEKNN
4KD7 Chain:B ((1-186))-VGSLNCIVAVSQNMGIGKNGDLPWPPLRNEFRYFQRMTTTSSVEGKQNLVIMGKKTWFSIPEKNRPLKGRINLVLSRELKEPPQGAHFLSRSLDDALKLTEQPELANKVDMVWIVGGSSVYKEAMNHPGHLKLFVTRIMQDFESDTFFPEIDLEKYKLLPEYPGVLSDVQEEKGIKYKFEVYEKND


General information:
TITO was launched using:
RESULT:

Template: 4KD7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -116424 for 1401 contacts (-83.1/contact) +
2D Compatibility (PS) -20210 + (NN) -11785 + (LL) 208
1D Compatibility (HY) -25200 + (ID) 8100
Total energy: -181511.0 ( -129.56 by residue)
QMean score : 0.669

(partial model without unconserved sides chains):
PDB file : Tito_4KD7.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4KD7-query.scw
PDB file : Tito_Scwrl_4KD7.pdb: