Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNQQKSLTLIVALTTSYGIGRSNSLPWKLKKEISYFKRVTSFVPTFDSFESMNVVLMGRKTWESIPLQFRPLKGRINVVITRNESLDLGNGIHSAKSLDHALELLYRTYGSESSVQINRIFVIGGAQLYKAAMDHPKLDRIMATIIYKDIHCDVFFPLKFRDKEWSSVWKKEKHSDLESWVGTKVPHGKINEDGFDYEFEMWTRDL
1DYR Chain:A ((2-206))
-NQQKSLTLIVALTTSYGIGRSNSLPWKLKKEISYFKRVTSFVPTFDSFESMNVVLMGRKTWESIPLQFRPLKGRINVVITRNESLDLGNGIHSAKSLDHALELLYRTYGSESSVQINRIFVIGGAQLYKAAMDHPKLDRIMATIIYKDIHCDVFFPLKFRDKEWSSVWKKEKHSDLESWVGTKVPHGKINEDGFDYEFEMWTRDL
General information:
TITO was launched using:
RESULT:
Template:
1DYR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -143730 for 1505 contacts (-95.5/contact) +
2D Compatibility (PS) -22221 + (NN) -10307 + (LL) 208
1D Compatibility (HY) -30800 + (ID) 10250
Total energy: -217100.0 ( -144.25 by residue)
QMean score : 0.760
(partial model without unconserved sides chains):
PDB file :
Tito_1DYR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1DYR-query.scw
PDB file :
Tito_Scwrl_1DYR.pdb
: