Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRMLLALLALSAARPSASAESHWCYEVQAESSNYPCLVPVKWGG---NCQKDRQSPINIVTTKAKVDKKLGRFFFSGYDKK--QTWTVQNNGHSVMMLLENKASISGGGLPAPYQAKQLHLHWSDLP-YKGSEHSLDGEHFAMEMHIVHEKEKGTSRNVKEAQDPEDEIAVLAFLVEAGTQVNEGFQPLVEALSNIPKPEMSTTMAESSLLDLLPKEEKLRHYFRYLGSLTTPTCDEKVVWTVFREPIQLHREQILAFSQKLYYD-KEQTVSMKDNVRPLQQLGQRTVIKSGAPGRPLPWALPALLGPMLACLLAGFLR |
| 4LU3 Chain:A ((21-286)) | ---------------------HWTYEGPH--------GQDHWPASYPECGNNAQSPIDIQTDSVTFDPDLPALQPHGYDQPGTEPLDLHNNGHTVQLSLPSTLYL--GGLPRKYVAAQLHLHWGQKGSPGGSEHQINSEATFAELHIVHYDSDS-YDSLSEAAERPQGLAVLGILIEVGETKNIAYEHILSHLHEVRHKDQKTSVPPFNLRELLPK--QLGQYFRYNGSLTTPPCYQSVLWTVFYRRSQISMEQLEKLQGTLFSTEEEPSKLLVQNYRALQPLNQRMVFASFIQAGSS-YT------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LU3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -90592 for 2086 contacts (-43.4/contact) +
2D Compatibility (PS) -27585 + (NN) -10249 + (LL) 3820
1D Compatibility (HY) -16800 + (ID) 4600
Total energy: -146006.0 ( -69.99 by residue)
QMean score : 0.353
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