Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRKFNKPLLALLIGSTLCSAAQAAAPGKPTIAWGNTKFAIVEVDQAATAYNNLVKVKNAADVSVSWNLWNGDAGTTAKILLNGKEAWSGPSTGSSGTANFKVNKGGRYQMQVALCNADGCTASDATEIVVADTDGSHLAPLKEPLLEKNKPYKQNSGKVVGSYFVEWGVYGRNFTVDKIPAQNLTHLLYGFIPICGGNGINDSLKEIEGSFQALQRSCQGREDFKVSIHDPFAALQKAQKGVTAWDDP---YKGNFGQLMALKQAHPDLKILPSIGGWTLSDPFFF-MGDKVKRDRFVGSVKEFLQTWKFFDGVDIDWEFPGGKGANPNLGSPQDGETYVLLMKELRAMLDQLSAE--TGRKYELTSAISAGKDKIDKVAYNVAQNSMDHIFLMSYDFYGPFDLKNLGHQTALNAPAWKPD-TAYTTVNGVNALLAQGVKPGKVVVGTAMYGRGWTGVNGYQNNIPFTGTATGPVKGTWKNGIVDYRQIAGQFMSGEWQYTYDATAEAPYVFKPSTGDLITFDDARSVQAKGKYVLDKQLGGLFSWEIDADN---GDILNSMNASLGNSAGVQ |
| 3G6M Chain:A ((19-385)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------TGSINAVYFTNWGIYGRNFQPADLQASKILHVLYSFMNLR--------------------------VDGTVYSGDTYADLEKHYSDD-SWNDIGTNAYGCVKQLYKLKKANRSLKIMLSIGGWTWSTNFPAAASTEATRATFAKTAVEFMKDWG-FDGIDVDWEYPA---------SETDANNMVLLLQRVRQELDSYSATYANGYHFQLSIAAPAGPSHYNVLKLAQLGSVLDNINLMAYDYAGSWD-SVSGHQTNLYPSTSNPSSTPFSTKAAVDAYIAAGVPASKIILGMPIYGRAFVGTDGP--GKPYSTIG----EGSWESGIWDYKVLPK----AGATVITDSAAGATYSYDSSSRTMISYDTPDMVRTKVSYAKGLGLGGSMFWEASADKTGSDSLIGTALSSMGSHD--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3G6M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -157449 for 3175 contacts (-49.6/contact) +
2D Compatibility (PS) -38338 + (NN) -20712 + (LL) 9576
1D Compatibility (HY) -23200 + (ID) 6100
Total energy: -236223.0 ( -74.40 by residue)
QMean score : 0.423
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