Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIGIIGAMEEEVTILKNKLTQLSEISVAHVKFYTGILKDREVVITQSGIGKVNAAISTTLLINKFKPDVIINTGSAGALDESLNVGDVLISDDVKYHDADATAFGYEYGQIPQMPVAFQSSKPLIEKVSQVVQQQQLTAKVGLIVSGDSFIGSVEQRQKIKKAFPNAMAVEMEATAIAQTCYQFNVPFVVVRAVSDLANGEAEMSFEAFLEKAAVSSSQTVEALVSQL
4JWT Chain:A ((24-250))
KIAIMGAMPEEISPILEKIGSYKSTSYAGNKYYEATYQGVELVIAYSKIGKVFSALSAATMIEHFGATKLLFSGVAGAISTNLKVGDLIVATKLSQHDLDITAFGHPYGYVPEGSVFVEADKDMIELSKKVALEMGKSVQEGIIATGDQFVANEERKNWIGTTF-GADALEMEGGSVGVVCNALNIPFFILRSISDAADMDASFSFDEFLESSAKESAEFIMKMVDEL
General information:
TITO was launched using:
RESULT:
Template:
4JWT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -140523 for 2050 contacts (-68.5/contact) +
2D Compatibility (PS) -24523 + (NN) -10288 + (LL) -140
1D Compatibility (HY) -17200 + (ID) 3900
Total energy: -196574.0 ( -95.89 by residue)
QMean score : 0.589
(partial model without unconserved sides chains):
PDB file :
Tito_4JWT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4JWT-query.scw
PDB file :
Tito_Scwrl_4JWT.pdb
: