Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSVSTASTEMSVRKIAAHMKSNPNAKVIFMVGAGISTSCGIPDFRSPGTGLYHNLARLKLPYPEAVFDVDFFQSDPLPFYTLAKELYPGNFRPSKFHYLLKLFQDKDVLKRVYTQNIDTLERQAGVKDDLIIEAHGSFAHCHCIGCGKVYPPQVFKSKLAEHPIKDFVK------------------------CDVCGELVKPAIVFFGEDLPDSFSETWLNDSEWLREKITTSGKHPQQPLVIVVGTSLAVYPFASLPEEIPRKVKRVLCNLETVGDFKANKRPTDLIVHQYSDEFAEQLVEELGWQEDFEKILTAQGGMGDNSKEQLLEIVHDLENLSLDQSEHESADKKDKKLQRLNGHDSDEDGASNSSSSQKAAKE |
| 4IAO Chain:A ((171-465)) | --------FFTIDHFIQKLHT--ARKILVLTGAGVSTSLGIPDFRSSE-GFYSKIKHLGLDDPQDVFNYNIFMHDPSVFYNIANMVLPPEKIYSPLHSFIKMLQMKGKLLRNYTQNIDNLESYAGISTDKLVQCHGSFATATCVTCHWNLPGERIFNKIRNLELPLCPYCYKKRREYFPEGYNNKSMSERPPYILNSYGVLKPDITFFGEALPNKFHKSIREDI-------------LECDLLICIGTSLKVAPVSEIVNMVPSHVPQVLINRDPVKHA-----EFDLSLLGYCDDIAAMVAQKCGWTIPH-KKWND---------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4IAO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -150965 for 2121 contacts (-71.2/contact) +
2D Compatibility (PS) -28303 + (NN) -20129 + (LL) 4064
1D Compatibility (HY) -22800 + (ID) 4400
Total energy: -222533.0 ( -104.92 by residue)
QMean score : 0.346
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