Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAEPDPSHPLETQAGKVQEAQDSDSDSEGGAAGGEADMDFLRNLFSQTLSLGSQKERLLDELTLEGVARYMQSERCRRVICLVGAGISTSAGIPDFRSPSTGLYDNLEKYHLPYPEAIFEISYFKKHPEPFFALAKELYPGQFKPTICHYFMRLLKDKGLLLRCYTQNIDTLERIAGLEQEDLVEAHGTFYTSHCVSASCRHEYPLSWMKEKIFSE---VTPKCEDCQSLVKPDIVFFGESLPARFFSCMQSD----------FLKVDLLLVMGTSLQVQPFASLISKAPLSTPRLLINKEKAGQSDPFLGMIMGLGGGMDFDSKKAYRDVAWLGECDQGCLALAELLGWKKELEDLVRREHASIDAQSGAGVPNPSTSASPKKSPPPAKDEARTTEREKPQ |
| 1Q1A Chain:A ((7-288)) | --------------------------------------------------------------SVRKIAAHMKSNPNAKVIFMVGAGISTSCGIPDFRSPGTGLYHNLARLKLPYPEAVFDVDFFQSDPLPFYTLAKELYPGNFRPSKFHYLLKLFQDKDVLKRVYTQNIDTLERQAGVKDDLIIEAHGSFAHCHCI--GCGKVYPPQVFKSKLAEHPIKDFVKCDVCGELVKPAIVFFGEDLPDSFSETWLNDSEWLREKITT-PQQPLVIVVGTSLAVYPFASLPEEIPRKVKRVLCNLETVGD----------------FKANKRPTDLIVHQYSDEFAEQLVEELGWQEDFEKILT------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1Q1A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -174923 for 2167 contacts (-80.7/contact) +
2D Compatibility (PS) -27969 + (NN) -11887 + (LL) 4016
1D Compatibility (HY) -24800 + (ID) 6200
Total energy: -241763.0 ( -111.57 by residue)
QMean score : 0.470
|
|
|