Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPPSISAFQAAYIGIEVLIALVS---VPGNVLVIWAVKVNQALRDATFCFIVSLAVADVAVGALVIPL-AILINIGPQTY--FHTCLMVACPVLILTQSSILALLAIAVDRYLRVKIPLRYKMVVTPRRAAVAIAGCWILSFVVGLTP--MFGWNNLSAVERAWAANGSMGEPVIKCEFEKVISMEYMV---YFNFFVWVLPPLLLMVLIYLEVFYLIRKQLNKKVSASSGDPQK-YYGKELKIAKSLALILFLFALSWLPLHILNCITLFCPSCHKPSILTYIAIFLTHGNSAMNPIVYAFRIQKFRVTFLKIWNDHFRCQPAPPIDEDLPEERPDD |
2Y02 Chain:B ((13-298)) | -------------GMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTWLWGSFLCELWTSLDVLCVT-ASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIMMHWWRDEDP-----QALKCYQDPGC-CDF--VTNRAYAIASSIISFYI----PLLIMIFVALRVYREAKEQIRKIDRASKRKTSRVMLMREHKALKTLGIIMGVFTLCWLPFFLVNIVNVFNRDL-VPDWLFVAFNWLGYANSAMNPIIYC-RSPDFRKAFKRLLA---------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Y02.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -246039 for 1968 contacts (-125.0/contact) +
2D Compatibility (PS) -28668 + (NN) -16026 + (LL) 3200
1D Compatibility (HY) -31200 + (ID) 5150
Total energy: -323883.0 ( -164.57 by residue)
QMean score : 0.270
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