Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDLKTVLSLPRYPGEFLHPVVYACTAVM-----LLCLLA----SFVTYIVHQSAIRISRKGRHTLLNFCFHAALTFTVFAGGINRTKYPILC---QAVGIVLHYSTLSTMLWIGVTARNIYKQVTKKAPLCLDTDQPPYPRQPLLRFYLVSGGVPFIICGVTAATNIRNYGTEDEDTAYCWMAWEPSLGAFYGPAAIITLVTCVYFLGTYVQLRRHPGRRYELRTQPEEQRRLATPEGGRGIRPGTPPAHDAPGASVLQNE----HSFQAQL-----RAAAFTLFLFTATWAFGALAVSQGHFLDMVFSCLYGAFCVTLGLFVLIHHCAKREDVWQCWW------ACC-PPRKDAHPALDANGAALGRAACLHSPG-------LGQPRGFAHPPGPCKMTNLQAAQGHASCLSPATPCCAKMHCEPLTADE-----AHVHLQEEGA------FGHDPHLHGCLQGRTKPPYFSRHPAEEPEYAYHIPSSLDGSPRSSRTDSPPSSLDGPAGTHTLACCTQG-DPFPMVTQPEGSDGSPALYSCPTQPGREAALGPGHLEMLRR--------TQSLP-------------FGGPSQNGLPKGKLLEGLPFGTDGTGNIRT-----GPWKNETTV---------- |
| 4R12 Chain:A ((15-587)) | --YTTLYS------------SYPCTKIMTSDGQFGCSSKHGGNSGILYLID------DDESYNNYFSYSQQKDIIVVLDTNYFNSTSVLNLHNKSKIEGIIVLTDTKKTYPY---SPDSRYP--NKIYGLYPNSNLEWNPN--ADGFTYFSFPFPIFAIDNQTSVAIRNVSKHNRDGQY--PAWGAELDSFMQGA--INSETCLRR-------------------------GFCEPVGGQSIWSSFSSKIDKEKEIILVMLPFDTTAFFRDLSIGADQSSFATVTLLSVIKSLAAVDRSSWNK-EVVFAFWNAERWGYVGSEYFINDLLN----FQCKTYNSDKSKCIDPPRADLAFQTQINFTKISTIIELNQIGRAQLDKNLGKYSLYLHTAGTKTSSVTDILDQVASSYENST-----ITFKPTTQTELPPSSSMSFLKKTNKIPVVVITDHDYKYSNPYYGYEQDDNENVLGSTLNDIVYILSTFIDRIAGGNNN----ITIDKNFINILYPCFTSSITCFNILMKTYPLNEVPNFYSSVFGTSLTTTLSPYETKLIHRLLYSITQYNSTLTNCTSDNDCPSSLCYSGQCVSSNTHLHNALSLGFDFDTSKNVWKIVNSSYPIFTESNWDYTALKVFKI |
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General information:
TITO was launched using:
| RESULT:
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Template: 4R12.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -178064 for 3991 contacts (-44.6/contact) +
2D Compatibility (PS) -51307 + (NN) -18337 + (LL) 4368
1D Compatibility (HY) -20000 + (ID) 4800
Total energy: -268140.0 ( -67.19 by residue)
QMean score : 0.146
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