Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEECWVTEIANGSKDGLDSNPMKDYMILSGPQKTAVAVLCTLLGLLSALENVAVLYLILSSHQLRRKPSYLFIGSLAGADFLASVVFACSFVNFHVFHGVDSKAVFLLKIGSVTMTFTASVGSLLLTAIDRYLCLRYPPSYKALLTRGRALVTLGIMWVLSALVSYLPLMGWTCCP--RPCSELF-------PLIPNDYLLSWLLFIA-FLFSGIIYTYGHVLWKAHQHVASLSGHQDR---------------------------------------------------------------------------------------------------------------------------------------------------QVPGMARMRLDVRLAKTLGLVLAVLLICWFPVLALMAHSLATTLS-DQVKKAFAFCSMLCLINSMVNPVIYALRSGEIRSSAHHCLAHWKKCVRGLGSEAKEEAPRSSVTETEADGKITPWPDSRDLDLSDC |
| 3EML Chain:A ((20-472)) | -------------------------------GSSVYITVELAIAVLAILGNVLVCWAVWLNSNLQ-NVTNYFVVSLAAADIAVGVL-AIPFAITISTGFCAACHGCLFIACFVLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNNCGQSQGCGEGQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYRSTLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHVLRQ--------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3EML.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -232679 for 2130 contacts (-109.2/contact) +
2D Compatibility (PS) -29461 + (NN) -16983 + (LL) 2696
1D Compatibility (HY) -21600 + (ID) 3300
Total energy: -301327.0 ( -141.47 by residue)
QMean score : 0.322
|
|
|