Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTALSSENCSFQYQLRQTNQPLDVNYLLFLIILGKILLNILTLGMRRKNTCQNFMEYFCISLAFVDLLLLVNISIILYFR----DFVLLSIRFTKYHICLFTQIISFTYGFLHYPVFLTACIDYCLNFSKTTKLSFKCQKLFYFFTVILIWISVLAYVLGDPAIYQSLKAQNAY-SRHCPFYVS---IQSYWL-SFFMVMILFVAFITCWEEVTTLVQAIRITSYMNETI-----LYFPFSSHSSYTVRSKKIFLSKLIVCFLS-------TWLPFVLLQVIIVLLKVQIPAYIEMNIPWLYFVNSFLIATVYWFNCHKLNLKDIGLPLDPFVNWKCCFIPLTIPNLEQIEKPISIMIC |
| 4XNV Chain:A ((38-382)) | -----SFKCALTKTGFQFYYLPAVYILVFIIGFLGNSVAIWMFVFHMKP--WSGISVYMFNLALADFLYVLTLPALIFYYFNKTDWIF------GDAMCKLQRFI-FHVNLYGSILFLTCISAHRYSGVVYPKSLGRLKKKNAICISVLVWLIVVVAI--SPILFYSGTGVRKNKTITCYDTTSDEYLRSYFIYSMCTTVAMFCVPLVLILGCYGLIVRALIYKMKKYTCTVCGYIYNPEDGDPDNGVNPGTDFKD--IVCPLCGVGKDQFEEVEEPLRRKSIYLVIIVLTVFAVSYIPFHVMKTMNLRARLDFQTPAMCAFNDRVYATYQVTRGLASLNSCVNPILYFLAGDTFRRR- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XNV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -297159 for 2352 contacts (-126.3/contact) +
2D Compatibility (PS) -31958 + (NN) 2720 + (LL) 1568
1D Compatibility (HY) -18800 + (ID) 2700
Total energy: -346329.0 ( -147.25 by residue)
QMean score : 0.215
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