Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MPSAIEAIYIILIAGELTIGIWGNGFIVLVNCIDWLKR--RDISLIDIILISLAISRICLLCVISLDG--FFMLLFPGTYGNSVLVSI-VNVVWTFANNSSLWFTSCLSIFYLLKIANISHPFFFWLKLKINKVMLAILLGSFLISLIISVPKNDDMWYHLFKVSHEENITWKFKVSKIPGTFKQLTLNLGVMVPFILCLISFFLLLFSLVRHTKQIRLHATGFRDPSTEAHMRAIKAVIIFLLLLIVYYPVFLVMTSSALIPQGKLVLMIGDIVTVIFPSSHSFILIMGNSKLREAFLKMLRFVKCFLRRRKPFVP---- |
| 4CIJ Chain:A ((3-269)) | MSGLKPCVDWLQVTFKTGQDSVK----------KCVEKLEKVFEILGLNEAEFLPLKNGKYGYKQGVAFQGNPVLAVYYDGADDMGIHVEMTGQGCRLFELHTSINWYELFYRLVY----------EYEVNITRLDVAVDDFKGYFKINTLVKKLKDDEVTSRFKKARHIENIVIE------GGETIGHTLYFGA--PSSDIQVRFYE---------KNVQMGMDIDVWNRTEIQLRDDRAHVVAQIIADDVLP-------------------LGEIVAGLLRNYIQFRTRKATDKNKKRW-PLARFWLNFLGDVQPLRIAKQM |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CIJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -275138 for 1898 contacts (-145.0/contact) +
2D Compatibility (PS) -26447 + (NN) 577 + (LL) 5820
1D Compatibility (HY) -7200 + (ID) 2150
Total energy: -304538.0 ( -160.45 by residue)
QMean score : 0.161
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