Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPHPRRYHSSERGSRGSYREHYRSRKHKRRRSRSWSSSSDRTRRRRREDSYHVRSRSSYDDRSSDRRVYDRRYCGSYRRNDYSRDRGDAYYDTDYRHSYEYQRENSSYRSQRSSRRKHRRRRRRSRTFSRSSSQHSSRRAKSVEDDAEGHLIYHVGDWLQERYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKEAARLEINVLEKINEKDPDNKNLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYPIHQVRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNSDYELTYNLE-KKRDER-----SVKSTAVRVVDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLFQTHDNREHLAMMERILGPIPSRMIRKTR---KQKYFYRGR--LDWDENTSAGRYV--RENCKPLRRYLTSEAEEHHQLFDLIESMLEYEPAKRLTLGEALQHPFFARLRAEPPNKLWDSSRDISR |
| 3LLT Chain:A ((20-360)) | -------------------------------------------------------------------------------------------------------------------------------------------------DEIVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHI-DNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNN-IVKYHGKFMYYDHMCLIFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKII-----KHELFCDFLYSILQIDPTLRPSPAELLKHKFLE------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LLT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -208551 for 2626 contacts (-79.4/contact) +
2D Compatibility (PS) -35033 + (NN) -12252 + (LL) 7460
1D Compatibility (HY) -32800 + (ID) 6200
Total energy: -287376.0 ( -109.43 by residue)
QMean score : 0.446
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