Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---------QPPLGTCGAQLSQLAPCARYSVPPLPGQALPAPGPECCSALGSVSRDCACGAIDIINSL----------------------------------PAKCGLPRVS----CQ----
1BEA Chain:? ((5-120))
SCVPGWAIPHNPLPSCRWYVTS-RTCG--IGPRLPW---PELKRRCCRELADIPAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATISGVAECPWILG
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29565 for 396 contacts (-74.7/contact) +
2D Compatibility (PS) -6538 + (NN) -511 + (LL) 808
1D Compatibility (HY) -6400 + (ID) 1000
Total energy: -43206.0 ( -109.11 by residue)
QMean score : 0.450
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: