Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-------------QQCRDELSNVQVCAPLLLPGAVNPAANSNCCAALQATNKDCLCNALRAATT-----------------------LTSLCNLPSFD--CGISA------------
1HSS Chain:A ((5-124))
MCYPGQAFQVPALPACRPLLRL-QCNGS-QVPEAVL----RDCCQQLAHISEWCRCGALYSMLDSMYKEHGAFPRCRREVVKLTAASITAVCRLPIVVDASGDGAYVCKDVAAYPDA
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -16579 for 359 contacts (-46.2/contact) +
2D Compatibility (PS) -6478 + (NN) -1156 + (LL) 436
1D Compatibility (HY) -4400 + (ID) 1000
Total energy: -29177.0 ( -81.27 by residue)
QMean score : 0.463
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: