Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VCNMSNDEFMKCQPAAAATSNPTTNPSAGCCSALSHADL--NCLCSYKNSPW---------------LSIY-NIDPNRAMQLPAKCGLTMPANC
1A32 Chain:? ((2-86))
---LTQERKREIIEQFKVHENDTGSPEVQIAILTEQINNLNEHLRVHKKDHHSRRGLLKMVGKRRRLLAYLRNKDVARYREIVEKLGL------
General information:
TITO was launched using:
RESULT:
Template:
1A32.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -14564 for 300 contacts (-48.5/contact) +
2D Compatibility (PS) -6882 + (NN) -3232 + (LL) 408
1D Compatibility (HY) 400 + (ID) 600
Total energy: -24470.0 ( -81.57 by residue)
QMean score : 0.253
(partial model without unconserved sides chains):
PDB file :
Tito_1A32.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1A32-query.scw
PDB file :
Tito_Scwrl_1A32.pdb
: