Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------------------------------------------------------APRGAH----GAGECGKTPADKMALKLAPCASAGQDP----KSAPSSGCCAAVHTIGKQSPK----CLCAVMLS----DTAKSAGIKPEA--AMSI----------PKRCNLVDRPVGYKCGAYTLP------------------------------------------------------------------------------------------------------------ |
| 1GUY Chain:A ((1-306)) | MRKKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNYADTANSDVIVVTSGALIKVNADITRACISQAAPLSPNAVIIMVNNPLDAMTYLAAEVSGFPKERVIGQAGVLDAARYRTFIAMEAGVSVEDVQAMLMGGHGDEMVPLPRFSTISGIPV-----SEFIAPDRLAQIVERTRKGGGEIVNLLKTGSAYYAPAAATAQMVEAVLKDKKRVMPVAAYLTGQYGLNDIYFGVPVILGAGGVEKILELPLNEEEMALLNASAKAVRATLDTL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GUY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -14651 for 510 contacts (-28.7/contact) +
2D Compatibility (PS) -9860 + (NN) -6776 + (LL) -132
1D Compatibility (HY) 800 + (ID) 750
Total energy: -31369.0 ( -61.51 by residue)
QMean score : 0.334
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