Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -----------------------------------------------------------------------------AGKCGKTPAEKVALKLAPCAKAAQDPG----ARPPAACCAAVRDIGTHQSHACLCAV-------LLSSTVRRSGVKP-EVAITI-----------PKRCKLANRPVGYKCGAYTL----PSLQG----------------------------------------------------------------------------------------------- |
1GUY Chain:A ((1-306)) | MRKKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNYADTANSDVIVVTSGALIKVNADITRACISQAAPLSPNAVIIMVNNPLDAMTYLAAEVSGFPKERVIGQAGVLDAARYRTFIAMEAGVSVEDVQAMLMGGHGDEMVPLPRFSTISGIPVSEFIAPDRLAQIVERTRKGGGEIVNLLKTGSAYYAPAAATAQMVEAVLKDKKRVMPVAAYLTGQYGLNDIYFGVPVILGAGGVEKILELPLNEEEMALLNASAKAVRATLDTL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GUY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -29261 for 580 contacts (-50.5/contact) +
2D Compatibility (PS) -10333 + (NN) -3519 + (LL) 0
1D Compatibility (HY) 0 + (ID) 650
Total energy: -43763.0 ( -75.45 by residue)
QMean score : 0.465
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