Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
----AEGPAGCQDDVV--ALNEACYQYV---QKGAPTVPP-------SQECCDAVRRVDVPCVCSYLGSPGVRDNI-------SMEKVFY----VSQQCGVSIPGNCGGSKV
1S6D Chain:A ((1-103))
PYGRGRTESGCYQQMEEAEMLNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNLDEKCMC-----PAIMMMLNEPMWIRMRDQVMSMAHNLPIECNL-MSQPCQM---
General information:
TITO was launched using:
RESULT:
Template:
1S6D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31419 for 474 contacts (-66.3/contact) +
2D Compatibility (PS) -7763 + (NN) -2593 + (LL) 240
1D Compatibility (HY) -7200 + (ID) 800
Total energy: -49535.0 ( -104.50 by residue)
QMean score : 0.518
(partial model without unconserved sides chains):
PDB file :
Tito_1S6D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S6D-query.scw
PDB file :
Tito_Scwrl_1S6D.pdb
: