Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------LTCGQVTS--SMTPCMSYLTGGGSPTPAC---CGGVKSLNSMAS-----------TPADRKAACGCLKSAAGAM-----TNLNMGNAASLPGKCGISLPYPISTSTDCSKVN-------- |
1QPO Chain:A ((1-284)) | GLSDWELAAARAAIARGLDEDLRYGPDVTTLATVPASATTTASLVTREAGVVAGLDVALLTLNEVLGTNGYRVLDRVEDGARVPPGEALMTLEAQTRGLLTAERTMLNLVGHLSGIATATAAWVDAVRGTKAKIRDTRKTLPGLRALQKYAVRTGGGVNHRLGLGDAALIKDNHVAAAGSVVDALRAVRNA-APDLPCEVEVDSLEQLDAVLPEKPELILLDNFAVWQTQTAVQRRDSRAPTVMLESSGGLSLQTAATY-AETGVDY---LAVGALTHSVRVLDIGLDM |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QPO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -27514 for 455 contacts (-60.5/contact) +
2D Compatibility (PS) -9121 + (NN) -3233 + (LL) -500
1D Compatibility (HY) -4800 + (ID) 650
Total energy: -45818.0 ( -100.70 by residue)
QMean score : 0.410
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