Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AITCGRVDTALAPCLGYLQG---GPG----PSAQCCGGVRNLNSAAVTTPDRQAACNCLKSAAGSIS---R---------LNANNAAALPGKCVVNIPYKISTSTNCATIRV
1HSS Chain:A ((15-106))
--------PALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHIS--------EWCRCGALYSMLDSMYKEH-GAFPRCRREVVKLTAASITAVCRLPIVVD------------
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46174 for 404 contacts (-114.3/contact) +
2D Compatibility (PS) -6412 + (NN) -2180 + (LL) 1860
1D Compatibility (HY) -5600 + (ID) 750
Total energy: -59256.0 ( -146.67 by residue)
QMean score : 0.320
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: