Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ITCGQVSSSLAPCVNFLKS---GGA----PSPQCCNGLGGMVNQAKSTADKQAACNCLKTAAKNMP---G---------LNPANAESLPSKCKVNIPYKISFSTNCNSIK
1HSS Chain:A ((15-106))
-------PALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHI--------SEWCRCGALYSMLDSMYKEH-GAFPRCRREVVKLTAASITAVCRLPIVVD-----------
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35853 for 404 contacts (-88.7/contact) +
2D Compatibility (PS) -6405 + (NN) -1282 + (LL) 1328
1D Compatibility (HY) -6000 + (ID) 700
Total energy: -48912.0 ( -121.07 by residue)
QMean score : 0.337
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: