Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -------------------------------------------------------------AITCGQVTHNVAPCFNYVKSGGAVPA---ACCKGVSNLNSMAK-----------TTADRQQTCNCLKSAAGSIK-----GLNANLAAGLPGKCGVNVPYKISTSTNCNNVK-------- |
1QPO Chain:A ((116-284)) | IATATAAWVDAVRGTKAKIRDTRKTLPGLRALQKYAVRTGGGVNHRLGLGDAALIKDNHVAAA------GSVVDALRAVRNAAPDLPCEVEVDS-LEQLDAVLPEKPELILLDNFAVWQTQTAVQRRDSRAPTVMLESSGGLSLQTAATY-AETGVDY---LAVGALTHSVRVLDIGLDM |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QPO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -24143 for 406 contacts (-59.5/contact) +
2D Compatibility (PS) -8473 + (NN) -1717 + (LL) 4
1D Compatibility (HY) -2000 + (ID) 700
Total energy: -37029.0 ( -91.20 by residue)
QMean score : 0.351
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