Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITCGQVAS--NISPCLTYVKSGGAVPA---ACCSGIRNLNGMAK-----------TTADRQAACNCLKQAAGGI-----KGLNPNLAAGLPGKCGVSVPYKISTTTNCAAVK-------- |
1QPO Chain:A ((1-284)) | GLSDWELAAARAAIARGLDEDLRYGPDVTTLATVPASATTTASLVTREAGVVAGLDVALLTLNEVLGTNGYRVLDRVEDGARVPPGEALMTLEAQTRGLLTAERTMLNLVGHLSGIATATAAWVDAVRGTKAKIRDTRKTLPGLRALQKYAVRTGGGVNHRLGLGDAALIKDNHVAAAGSVVDALRAVRNAAPDLPCEVEVDS-LEQLDAVLPEKPELILLDNFAVWQTQTAVQRRDSRAPTVMLESSGGLSLQTAATY-AETGVDY---LAVGALTHSVRVLDIGLDM |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QPO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -37371 for 459 contacts (-81.4/contact) +
2D Compatibility (PS) -9054 + (NN) -3193 + (LL) -296
1D Compatibility (HY) -2800 + (ID) 850
Total energy: -53564.0 ( -116.70 by residue)
QMean score : 0.362
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