Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AISCGAVTGDLSPCLTYLTG---GPG----PSPQCCGGVKKLLAAANTTPDRQAACNCMKSAASSIT---K---------LNTNNAAALPGKCGVNIPYKISTSTNCNTVK
1HSS Chain:A ((15-106))
--------PALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHI--------SEWCRCGALYSMLDSMYKEH-GAFPRCRREVVKLTAASITAVCRLPIVVD-----------
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37592 for 404 contacts (-93.0/contact) +
2D Compatibility (PS) -6327 + (NN) -1316 + (LL) 1604
1D Compatibility (HY) -6000 + (ID) 650
Total energy: -50281.0 ( -124.46 by residue)
QMean score : 0.308
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: