Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AITCQQVTVAVTPCIGYART---GGT----MPPDCCNGVRNLNSAAKNTPDRQQACICLKQMS-SIP---G---------INMSIVSEIPAKCNVNIGYPIAMSTDCSKVK
1HSS Chain:A ((15-105))
--------PALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHIS--------EWCRCGALYSMLDSMYKEH-GAFPRCRREVVKLTAASITAVCRLPIVV------------
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -57003 for 392 contacts (-145.4/contact) +
2D Compatibility (PS) -5917 + (NN) 2460 + (LL) 1560
1D Compatibility (HY) -4400 + (ID) 750
Total energy: -64050.0 ( -163.39 by residue)
QMean score : 0.316
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: