Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AISCGQVVTSLTPCINYVRQ---GG---AI------------PAACCSGIKTLNSQATSTPDRQTACNCIKSAARSISG----IN-----FGLASSLPGKCGVNLPYKISPSIDCSTVQ
1W2Q Chain:A ((22-114))
-------RVNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEME-----N-TQGCMCEALQQIMENQCDRLQDRQMVQQFKRELMSLPQQCNFRAP-------------
General information:
TITO was launched using:
RESULT:
Template:
1W2Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31901 for 395 contacts (-80.8/contact) +
2D Compatibility (PS) -6600 + (NN) 790 + (LL) 1320
1D Compatibility (HY) -800 + (ID) 650
Total energy: -37841.0 ( -95.80 by residue)
QMean score : 0.296
(partial model without unconserved sides chains):
PDB file :
Tito_1W2Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W2Q-query.scw
PDB file :
Tito_Scwrl_1W2Q.pdb
: