Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-------AIECSDVLSR---PVHCLSYFVTPRATLTP----------TSACCRESEEVLGMANSMGAKEDLCNCFVGLI--RGFRPN----PNKIEGLLSSCALQLFFPIDPVTALPDCTQIQ
1S6D Chain:A ((1-103))
PYGRGRTESGCYQQMEEAEMLNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNL--------DEKCMCPAIMMMLNEPMWIRMRDQVMSMAHNLPIECN------LMSQPCQM------
General information:
TITO was launched using:
RESULT:
Template:
1S6D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -55580 for 479 contacts (-116.0/contact) +
2D Compatibility (PS) -7383 + (NN) -4494 + (LL) 1356
1D Compatibility (HY) -3600 + (ID) 450
Total energy: -70151.0 ( -146.45 by residue)
QMean score : 0.289
(partial model without unconserved sides chains):
PDB file :
Tito_1S6D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S6D-query.scw
PDB file :
Tito_Scwrl_1S6D.pdb
: