Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------LSCSVVAS--NLAQCLTYLRNGGAVPP---ACCKGVGTLNNAAK-----------TTQDRRDACNCIKTTAAQL-----GGVNSNYAAALPGLCHVNIPYKISTSTNCASIK-------- |
1QPO Chain:A ((1-284)) | GLSDWELAAARAAIARGLDEDLRYGPDVTTLATVPASATTTASLVTREAGVVAGLDVALLTLNEVLGTNGYRVLDRVEDGARVPPGEALMTLEAQTRGLLTAERTMLNLVGHLSGIATATAAWVDAVRGTKAKIRDTRKTLPGLRALQKYAVRTGGGVNHRLGLGDAALIKDNHVAAAGSVVDALRAVRNAAPDLPCEVEVDS-LEQLDAVLPEKPELILLDNFAVWQTQTAVQRRDSRAPTVMLESSGGLSLQTAATY-AETGVDY---LAVGALTHSVRVLDIGLDM |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QPO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -35314 for 459 contacts (-76.9/contact) +
2D Compatibility (PS) -8962 + (NN) -2804 + (LL) -296
1D Compatibility (HY) -1600 + (ID) 750
Total energy: -49726.0 ( -108.34 by residue)
QMean score : 0.451
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