Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VTCGQVSSSLAPCIAYLQK---GGT----PAPGCCNGVKSLVGAAQTTADKQAVCNCLKGAAGQVP---G---------LNNQYAQSLPSLCGVNIPYKISTSTNCASIKF
1HSS Chain:A ((15-106))
-------PALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHI--------SEWCRCGALYSMLDSMYKEH-GAFPRCRREVVKLTAASITAVCRLPIVVD------------
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48770 for 404 contacts (-120.7/contact) +
2D Compatibility (PS) -6425 + (NN) -1193 + (LL) 1660
1D Compatibility (HY) -5600 + (ID) 600
Total energy: -60928.0 ( -150.81 by residue)
QMean score : 0.294
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: