Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VDCGQVNSSLASCIPFLTGG---VASP---SASCCAGVQNLKTLAPTTADRRAACDCIKAAAARF-------PT----IKQDAASSLPKKCGVDINIPISKTTNCQAIN
1HSS Chain:A ((15-104))
-------PALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHIS--------EWCRCGALYSMLDSMYKEHGAFPRCRREVVKLTAASITAVCRLPIV-------------
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45451 for 414 contacts (-109.8/contact) +
2D Compatibility (PS) -6656 + (NN) -1973 + (LL) 1408
1D Compatibility (HY) -5200 + (ID) 650
Total energy: -58522.0 ( -141.36 by residue)
QMean score : 0.419
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: