Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
IDCAQVNLLLGTCMPYLIGF---DSSP---SLACCAGVRNLKRLAPTTADRRVACDCVKAAAARHP-------N----IRDDAASTLPNKCGVDFNIPVSNTTKCQE
1HSS Chain:A ((15-104))
-------PALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHI--------SEWCRCGALYSMLDSMYKEHGAFPRCRREVVKLTAASITAVCRLPIV-----------
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -51030 for 418 contacts (-122.1/contact) +
2D Compatibility (PS) -6660 + (NN) -2392 + (LL) 1748
1D Compatibility (HY) -3600 + (ID) 500
Total energy: -62434.0 ( -149.36 by residue)
QMean score : 0.338
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: