Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ITCGQVASSLTSCIPFITK---GGI----VPPSCCAGVKSLNAAAKTTPDRQAVCNCLKSEAGRIG---GF----------NANNAAILPGKCGVSIPYKISTSTNCASIKF
1HSS Chain:A ((15-106))
-------PALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHI--------SEWCRCGALYSMLDSMYKEH--GAFPRCRREVVKLTAASITAVCRLPIVVD------------
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41356 for 399 contacts (-103.6/contact) +
2D Compatibility (PS) -6126 + (NN) 397 + (LL) 1680
1D Compatibility (HY) -4800 + (ID) 700
Total energy: -50905.0 ( -127.58 by residue)
QMean score : 0.212
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: