Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ITCSDVNKALAPCVSYLTG---GG-A---PTSACCDGVRTLKSLSPTTSDRQTACQCAKDAASRNP-------N----IREDAAAALPNKCGVQTDIPISRSTDCST
1HSS Chain:A ((15-103))
-------PALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHIS--------EWCRCGALYSMLDSMYKEHGAFPRCRREVVKLTAASITAVCRLPI------------
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23764 for 400 contacts (-59.4/contact) +
2D Compatibility (PS) -6262 + (NN) 187 + (LL) 592
1D Compatibility (HY) -4400 + (ID) 550
Total energy: -34197.0 ( -85.49 by residue)
QMean score : 0.481
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: