Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--------AITCGQVGSSLAPCIPYATGRASALPASCCSGVKSLNSAARTSADRQAACRCLKSLANSVKSVN---------------MGTVATI---PGKCGVSVGFPISMSTD----CNKIS-------
1B0A Chain:A ((2-122))
AAKIIDGKTI-AQQVRSEVAQKVQARIAAGLRAP-----GLAVV--LVGSNPASQIYVASKRKACEEV-GFVSRSYDLPETTSEAELLELIDTLNADNTIDGILVQLPLPAGIDNVKVLERIHPDKDVDG
General information:
TITO was launched using:
RESULT:
Template:
1B0A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25298 for 454 contacts (-55.7/contact) +
2D Compatibility (PS) -8507 + (NN) -1073 + (LL) 208
1D Compatibility (HY) -3600 + (ID) 750
Total energy: -39020.0 ( -85.95 by residue)
QMean score : 0.303
(partial model without unconserved sides chains):
PDB file :
Tito_1B0A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B0A-query.scw
PDB file :
Tito_Scwrl_1B0A.pdb
: