Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
GGVVEICN----VSKDDLMPCKPAVT-----QPPAQPV----QACCSVLSTANLTCFCEF-------------GNNYPSLLRMF-GIDPDLAKAL------PGECKLNSPPG---C-----
1BEA Chain:? ((5-120))
-----SCVPGWAIPHNPLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADIPAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATISGVAECPWILG
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27531 for 405 contacts (-68.0/contact) +
2D Compatibility (PS) -8059 + (NN) -6575 + (LL) 144
1D Compatibility (HY) -4800 + (ID) 950
Total energy: -47771.0 ( -117.95 by residue)
QMean score : 0.351
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: