Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
EMAHGVC----NLSSAGIRACQPAAA----IRNPTDQPS---SECCAALAGADLACLC---------RYKNAAGVWVRFY-----RIDINRAMGL------PGKCGLAMPAN---C-----
1BEA Chain:? ((5-120))
-----SCVPGWAIPHNPLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADIPAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATISGVAECPWILG
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27170 for 380 contacts (-71.5/contact) +
2D Compatibility (PS) -8155 + (NN) -2678 + (LL) 328
1D Compatibility (HY) -2000 + (ID) 700
Total energy: -40375.0 ( -106.25 by residue)
QMean score : 0.435
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: